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minimax-ai/microbe

v0.1.0MIT

16S/ITS downstream microbiome analysis via local Rscript (alpha/beta diversity, composition, differential abundance, co-occurrence, random forest).

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microbe

Use when the user has a 16S or ITS feature table plus taxonomy and metadata and needs alpha/beta diversity, composition bars, differential abundance, co-occurrence networks, random-forest biomarkers, or a taxonomy tree. Drive the microbe MCP tools with local Rscript.