baranzinilab/tkoi-agent
v2.0.0
Run tKOI enrichment and contextualize its exact saved analysis graph.
tkoi-analysis
Set up R and tKOI, prepare human differential-expression results, run knowledge-graph enrichment, and save the exact analysis graph for contextualization. Use for tKOI analyses and their input preparation.
tkoi-knowledge-graph
Contextualize saved tKOI enrichment by searching nodes, traversing connection layers and finding paths in the exact igraph used for that analysis. Use for tKOI result interpretation and local graph evidence.