jinko-task-literature-search
Find and shortlist biomedical publications from PubMed for knowledge, data, or reusable-model evidence. Use for query framing, PMID/DOI discovery, bibliographic normalization, evidence prioritization, and best-effort public full-text retrieval before synthesis, extraction, or modeling. Do not use for ClinicalTrials.gov-only scoping, systematic reviews, quantitative extraction, curve digitization, calibration, or model implementation.
- License
- MIT
- Compatibility
- Requires network access, requests, and USER_EMAIL in .env for NCBI identity. NCBI_API_KEY is optional.
Pinned to revision f5510623cac3, so it is the text this page describes rather than whatever the author pushed since.
Files
- skills/jinko-task-literature-search/SKILL.md
- skills/jinko-task-literature-search/agents/openai.yaml
- skills/jinko-task-literature-search/assets/.env.example
- skills/jinko-task-literature-search/assets/data-recipes.md
- skills/jinko-task-literature-search/assets/knowledge-recipes.md
- skills/jinko-task-literature-search/assets/models-recipes.md
- skills/jinko-task-literature-search/assets/pubmed-primitives.md
- skills/jinko-task-literature-search/assets/shortlist-schema.json
- skills/jinko-task-literature-search/evals/evals.json
- skills/jinko-task-literature-search/evals/files/scientific-use-cases.md
- skills/jinko-task-literature-search/scripts/common.py
- skills/jinko-task-literature-search/scripts/compile_results.py
- skills/jinko-task-literature-search/scripts/literature_search.py
- skills/jinko-task-literature-search/scripts/pmc_open_access.py
- skills/jinko-task-literature-search/scripts/publication_download.py
- skills/jinko-task-literature-search/scripts/validate_shortlist.py
Every link opens the file at its source, pinned to the revision this page describes.