jinko-model
Build or edit a Jinkō computational model (QSP/PK-PD) via the jinko-sdk: parameters, categorical parameters, compartments, species, ODEs, reactions, dosing events, algebraic rules, baseline checks, solving options, units, and component tags. Use this skill whenever the user wants to create a model from scratch, create an empty model, edit an existing model, add or modify components, apply input/source/output tags, configure unit checking, define model-level dosing events, combine two models and resolve their conflicts, validate diagnostics, or debug model sanity or simple_solve errors. Prefer editing existing models over recreating them. Do not use this skill for running trials; use jinko-trial for trial execution.
- License
- MIT
- Compatibility
- Check set-up with the `jinko-sdk-setup` skill. Model creation/editing requires write access to the Jinkō project.
Pinned to revision f5510623cac3, so it is the text this page describes rather than whatever the author pushed since.
Files
- skills/jinko-model/SKILL.md
- skills/jinko-model/agents/openai.yaml
- skills/jinko-model/evals/evals.json
- skills/jinko-model/references/model-combination.md
- skills/jinko-model/references/model-components.md
- skills/jinko-model/references/model-validation.md
- skills/jinko-model/references/scientific-scoped-tags.md
- skills/jinko-model/references/unit_docs.md
- skills/jinko-model/references/units_static_info.json
- skills/jinko-model/scripts/create_minimal_model.py
- skills/jinko-model/scripts/edit_existing_model_batch.py
Every link opens the file at its source, pinned to the revision this page describes.