tiledbvcf
Stores and retrieves genomic variant calls with TileDB-VCF. Use for indexed single-sample VCF/BCF ingestion, incremental cohorts, region and sample queries, streaming results, allele statistics, QC, and VCF/BCF export locally or through TileDB Cloud.
- Version
- 1.3
- License
- MIT license
- Compatibility
- Requires a native TileDB-VCF installation and Python 3.9-3.12 for the reviewed Conda builds. bcftools compresses/indexes input fixtures. Installation and remote storage need network access; TileDB Cloud needs its Python client, account token, and storage permissions.
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