pyhealth
Builds and validates PyHealth clinical machine-learning pipelines for EHR, signals, imaging, and medical codes. Use for PyHealth dataset loading, MIMIC-III/IV, eICU or OMOP prediction tasks, patient-level evaluation, mortality/readmission/length-of-stay modeling, medication recommendation, sleep staging, Trainer checkpoints, and ICD/ATC/NDC/RxNorm mapping.
- Version
- 1.3
- Compatibility
- Requires Python 3.12 or 3.13 and PyHealth 2.0.2 (Torch 2.7.1). Network access is needed for installation, public datasets and uncached medical-code resources. Restricted clinical datasets require authorized local access.
Pinned to revision 68105dd992f1, so it is the text this page describes rather than whatever the author pushed since.
Files
- skills/pyhealth/SKILL.md
- skills/pyhealth/SKILL_CN.md
- skills/pyhealth/assets/starter_pipeline.py
- skills/pyhealth/references/datasets.md
- skills/pyhealth/references/examples.md
- skills/pyhealth/references/installation.md
- skills/pyhealth/references/medcode.md
- skills/pyhealth/references/models.md
- skills/pyhealth/references/tasks.md
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