depmap
Retrieves and analyzes Cancer Dependency Map (DepMap) release data, including CRISPR Chronos gene effects, cancer model annotations, omics biomarkers, and PRISM drug sensitivity. Supports cancer-selective dependency, co-essentiality, and candidate synthetic-lethality analyses with release-aware identifiers and statistical checks.
- Version
- 1.2
- License
- CC-BY-4.0
- Compatibility
- Requires Python 3.10+ with numpy, pandas, and scipy>=1.11 for the bundled helpers. Network access is needed for release discovery; downloading current data may require browser verification through the DepMap portal.
Pinned to revision 68105dd992f1, so it is the text this page describes rather than whatever the author pushed since.
Files
- skills/depmap/SKILL.md
- skills/depmap/SKILL_CN.md
- skills/depmap/references/dependency_analysis.md
- skills/depmap/scripts/depmap_data.py
Every link opens the file at its source, pinned to the revision this page describes.