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kalarislabs/research-agent-skills

v1.1.1MIT

281 Agent Skills for researchers: scientific and research paper writing, journal formats, literature review, citations, data science, ML research and domain science.

pymatgen

Analyzes, validates, converts, and transforms crystal structures and molecules with pymatgen. It covers CIF/POSCAR/XYZ/JSON conversion, symmetry-tolerance sweeps, local phase diagrams from computed entries, VASP and Q-Chem I/O, band structure and DOS parsing, and bounded Materials Project (mp-api) queries. Use when validating a CIF or checking disorder and oxidation states. Use when assigning space groups and testing symprec sensitivity. Use when converting structure files and checking for representation loss. Use when building a convex hull from total energies. Use when querying Materials Project with explicit fields and limits. Not for general molecular dynamics or non-materials cheminformatics.

Version
1.3
License
MIT
Compatibility
Python 3.11+ with uv. The verified snapshot uses pymatgen 2026.5.4, pymatgen-core 2026.7.16, and mp-api 0.46.4. Bundled help and planning CLIs use only the standard library; local scientific execution lazily requires the pinned pymatgen packages. Materials Project access additionally requires explicit network approval and the single named secret MP_API_KEY.
Read SKILL.md at the source

Pinned to revision df088027ff23, so it is the text this page describes rather than whatever the author pushed since.

Pre-approved tools experimental

Experimental field. Support varies between clients, so this list is what the author declared, not what your client will enforce.

  • Read
  • Write
  • Bash
  • Glob
  • Python

Files

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